Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RN7SL714P-201ENST00000487050 298 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RNA5SP418-201ENST00000515951 117 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 NATP-201ENST00000523491 878 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 TPRX1P1-201ENST00000557620 319 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC025283.1-201ENST00000572039 734 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC073046.2-201ENST00000604756 527 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AL008723.3-201ENST00000608926 449 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC068726.1-201ENST00000610993 341 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC024255.1-201ENST00000614376 102 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC004836.1-201ENST00000623032 634 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC016542.2-201ENST00000624201 619 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.66□□□□□ -1.5
CSNK1A1P48729 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSNK1A1P48729 AC073365.1-203ENST00000641055 1992 ntBASIC5.66□□□□□ -1.5
CSNK1A1P48729 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 OR11H13P-201ENST00000359695 979 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 GTF3AP6-201ENST00000432585 986 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AC128677.1-201ENST00000436016 442 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 AL356121.1-201ENST00000442911 156 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AC124891.1-201ENST00000536322 519 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 AP003789.1-201ENST00000617737 605 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 AC005899.6-201ENST00000620729 297 ntBASIC5.65□□□□□ -1.5
CSNK1A1P48729 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.65□□□□□ -1.5
CSNK1A1P48729 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CSNK1A1P48729 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CSNK1A1P48729 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
CSNK1A1P48729 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.64□□□□□ -1.51
CSNK1A1P48729 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.64□□□□□ -1.51
CSNK1A1P48729 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.64□□□□□ -1.51
CSNK1A1P48729 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 AL591135.1-201ENST00000401578 5914 ntBASIC5.64□□□□□ -1.51
CSNK1A1P48729 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CSNK1A1P48729 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms