Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 RNA5SP387-201ENST00000364226 106 ntBASIC2.63□□□□□ -1.99
USH2AO75445 RNA5SP505-201ENST00000364748 108 ntBASIC2.63□□□□□ -1.99
USH2AO75445 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC2.63□□□□□ -1.99
USH2AO75445 CYP4F30P-202ENST00000420048 405 ntBASIC2.63□□□□□ -1.99
USH2AO75445 RSL24D1P6-201ENST00000426934 401 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 RPL23AP68-201ENST00000480924 445 ntBASIC2.63□□□□□ -1.99
USH2AO75445 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.63□□□□□ -1.99
USH2AO75445 AC073916.1-201ENST00000545095 130 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AL049872.1-201ENST00000556323 322 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 RPL27-207ENST00000590864 569 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 AL162431.4-201ENST00000604674 411 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
USH2AO75445 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 OR51A10P-201ENST00000307165 937 ntBASIC2.63□□□□□ -1.99
USH2AO75445 OR4K12P-201ENST00000406538 961 ntBASIC2.63□□□□□ -1.99
USH2AO75445 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 NDUFA12P1-201ENST00000455914 406 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC007485.2-201ENST00000623493 1667 ntBASIC2.63□□□□□ -1.99
USH2AO75445 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 AP002370.1-201ENST00000528055 1602 ntBASIC2.63□□□□□ -1.99
USH2AO75445 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
USH2AO75445 OR11H13P-201ENST00000359695 979 ntBASIC2.63□□□□□ -1.99
USH2AO75445 RNA5SP123-201ENST00000363244 119 ntBASIC2.63□□□□□ -1.99
USH2AO75445 RN7SKP6-201ENST00000364795 319 ntBASIC2.63□□□□□ -1.99
USH2AO75445 RBBP4P4-201ENST00000398588 1289 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 HMGB3P24-201ENST00000433260 622 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC2.63□□□□□ -1.99
USH2AO75445 DSTNP2-201ENST00000504533 515 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 RBM22P12-201ENST00000567098 1255 ntBASIC2.63□□□□□ -1.99
USH2AO75445 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC099654.6-201ENST00000636487 512 ntBASIC2.63□□□□□ -1.99
USH2AO75445 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms