Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXA3O43365 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 AC010886.1-201ENST00000437380 2869 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 DDX10P2-201ENST00000417796 2614 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 NXT2-204ENST00000372107 937 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 RNU6-31P-201ENST00000384388 108 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 SNORD116-4-201ENST00000384733 96 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXA3O43365 MCTS2P-201ENST00000394552 546 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL451061.1-201ENST00000407887 862 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 RNU4-72P-201ENST00000410754 173 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 USP9YP26-201ENST00000421008 661 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AC134879.1-201ENST00000426062 394 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 E2F6P1-201ENST00000428850 745 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AC005189.1-201ENST00000431286 310 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 DBIL5P2-201ENST00000443827 253 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 HMGB3P6-201ENST00000444896 598 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 MYO5BP2-201ENST00000449815 1277 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL354872.1-201ENST00000456361 967 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 RPLP0P1-201ENST00000457002 361 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 CST12P-201ENST00000457644 362 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 RN7SL251P-201ENST00000464175 297 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 RPS3AP43-201ENST00000479743 781 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AC084878.1-201ENST00000480555 648 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 RPL7L1P7-201ENST00000509986 724 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 AC117532.1-201ENST00000514638 323 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 AP001646.2-201ENST00000528645 1156 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 OR5AM1P-201ENST00000532136 1032 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 OR7E161P-201ENST00000533722 967 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 AL132640.1-201ENST00000559594 619 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 GARSP1-201ENST00000570895 719 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 MTND4LP24-201ENST00000572277 291 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AP001094.1-201ENST00000579805 193 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA3O43365 AL031777.2-201ENST00000611953 196 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 TNFSF15-201ENST00000374044 2789 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HOXA3O43365 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 HSPD1P7-201ENST00000447985 1686 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 ZNF812P-201ENST00000457674 1694 ntBASIC5.91□□□□□ -1.46
HOXA3O43365 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA3O43365 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC5.91□□□□□ -1.46
HOXA3O43365 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA3O43365 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HOXA3O43365 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXA3O43365 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXA3O43365 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HOXA3O43365 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms