Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.74□□□□□ -1.17
SOX1O00570 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 OR52K3P-201ENST00000531655 943 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC090022.1-201ENST00000546569 311 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.74□□□□□ -1.17
SOX1O00570 AL512310.9-201ENST00000553311 948 ntBASIC7.74□□□□□ -1.17
SOX1O00570 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.74□□□□□ -1.17
SOX1O00570 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.74□□□□□ -1.17
SOX1O00570 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 AC068135.2-201ENST00000569293 1028 ntBASIC7.74□□□□□ -1.17
SOX1O00570 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 VN1R88P-201ENST00000596787 292 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC078795.2-201ENST00000602835 1252 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC024589.2-201ENST00000605642 1294 ntBASIC7.74□□□□□ -1.17
SOX1O00570 RN7SKP299-201ENST00000606679 301 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AL021707.7-201ENST00000607991 416 ntBASIC7.74□□□□□ -1.17
SOX1O00570 OR51C1P-201ENST00000608504 942 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AL450489.1-201ENST00000612071 468 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 AC005514.1-201ENST00000623521 208 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AL160394.1-201ENST00000624765 724 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC003992.1-201ENST00000635364 557 ntBASIC7.74□□□□□ -1.17
SOX1O00570 AC139713.2-210ENST00000641741 992 ntBASIC7.74□□□□□ -1.17
SOX1O00570 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.74□□□□□ -1.17
SOX1O00570 AC009108.3-201ENST00000602739 3515 ntBASIC7.74□□□□□ -1.17
SOX1O00570 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SOX1O00570 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SOX1O00570 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.74□□□□□ -1.17
SOX1O00570 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SOX1O00570 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.73□□□□□ -1.17
SOX1O00570 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SOX1O00570 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 RN7SKP85-201ENST00000411349 318 ntBASIC7.73□□□□□ -1.17
SOX1O00570 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 ELOCP9-201ENST00000418624 239 ntBASIC7.73□□□□□ -1.17
SOX1O00570 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 RPL5P34-201ENST00000426545 891 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AC124944.2-201ENST00000429866 1242 ntBASIC7.73□□□□□ -1.17
SOX1O00570 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 CEACAMP5-201ENST00000448037 961 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.73□□□□□ -1.17
SOX1O00570 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.73□□□□□ -1.17
SOX1O00570 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 OR5AM1P-201ENST00000532136 1032 ntBASIC7.73□□□□□ -1.17
SOX1O00570 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SOX1O00570 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 AL390726.5-202ENST00000564800 256 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AGGF1P4-201ENST00000568249 801 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 AP001981.2-201ENST00000603241 418 ntBASIC7.73□□□□□ -1.17
SOX1O00570 QTRT1P1-201ENST00000604344 1078 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AL139286.2-201ENST00000606838 396 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms