Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC129502.1-201ENST00000623261 1654 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC087565.3-202ENST00000642085 1603 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 MIR188-201ENST00000385034 86 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 RPL24P7-201ENST00000399435 453 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 PSMA6P2-201ENST00000457574 686 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 OR9N1P-201ENST00000491296 333 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 SNORA74.1-201ENST00000516320 180 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 SCARNA21.2-201ENST00000516600 166 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 SAA3P-201ENST00000533267 365 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL035410.2-201ENST00000604963 864 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 AL589743.6-201ENST00000611025 117 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
USP35Q9P2H5 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
USP35Q9P2H5 AC009135.2-201ENST00000624136 1768 ntBASIC9.07□□□□□ -0.96
USP35Q9P2H5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC127070.3-201ENST00000503695 3263 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 PPIAP24-201ENST00000328558 471 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 RNA5SP321-201ENST00000362722 111 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 RN7SKP275-201ENST00000364626 301 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC019070.1-201ENST00000415008 1024 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 COX4I1P2-201ENST00000447446 547 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 PRDX1P1-201ENST00000449329 596 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 RN7SL160P-201ENST00000468558 284 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC093719.1-201ENST00000480427 441 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AP005202.1-201ENST00000489915 867 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC090115.2-201ENST00000548060 883 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 ANP32BP1-202ENST00000568553 737 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC090826.1-203ENST00000569235 490 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 SNORD96A-201ENST00000606577 79 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC084036.1-201ENST00000609190 508 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 AC119674.1-220ENST00000641502 1048 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 Z83820.1-201ENST00000456978 1499 ntBASIC9.06□□□□□ -0.96
USP35Q9P2H5 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
USP35Q9P2H5 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
USP35Q9P2H5 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC9.05□□□□□ -0.96
USP35Q9P2H5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms