Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CYCSP25-201ENST00000525280 316 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC036111.2-201ENST00000533247 901 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 GLYATL1P2-202ENST00000588046 902 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC004890.3-201ENST00000605566 1095 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 SNORA74.4-201ENST00000607595 199 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AL122023.1-201ENST00000622847 530 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC011416.1-201ENST00000514947 1732 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC024587.1-201ENST00000505925 2157 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 EIF3EP1-201ENST00000433978 1316 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AP004289.1-201ENST00000436307 2205 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC073342.2-201ENST00000595842 1800 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 AC092724.1-201ENST00000624623 3397 ntBASIC6.66□□□□□ -1.34
SIX2Q9NPC8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SIX2Q9NPC8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 ZNF101P1-201ENST00000435701 1720 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AL359091.1-201ENST00000449048 1734 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 BTG3P1-201ENST00000435859 716 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 POU5F1P5-201ENST00000445059 658 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC234771.2-201ENST00000445718 597 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 RPS18P1-201ENST00000447840 458 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC099670.1-201ENST00000455141 783 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 RPL7L1P3-201ENST00000455249 689 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 RPL34P33-201ENST00000486062 334 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 MRPL57P6-201ENST00000506570 309 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 HMGN1P16-201ENST00000508308 283 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 CYP4F27P-201ENST00000514557 494 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 RN7SKP248-201ENST00000516278 305 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 SNORA74.1-201ENST00000516320 180 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 RNA5SP434-201ENST00000516647 121 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC005632.2-201ENST00000564271 828 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 AC008555.7-201ENST00000605008 583 ntBASIC6.65□□□□□ -1.34
SIX2Q9NPC8 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.65□□□□□ -1.34
SIX2Q9NPC8 LINC01613-201ENST00000561476 2780 ntBASIC6.65□□□□□ -1.35
SIX2Q9NPC8 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.35
SIX2Q9NPC8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 RNU1-59P-201ENST00000364829 162 ntBASIC6.64□□□□□ -1.35
SIX2Q9NPC8 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SIX2Q9NPC8 PRELID1P1-201ENST00000403549 660 ntBASIC6.64□□□□□ -1.35
SIX2Q9NPC8 RN7SKP108-201ENST00000411367 328 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms