Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 AC073592.6-201ENST00000624271 415 ntBASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 AC022726.2-201ENST00000634673 547 ntBASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 LINC02495-203ENST00000636704 242 ntBASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 CASC19-274ENST00000642018 970 ntBASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 AL353743.3-201ENST00000442109 1468 ntBASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UPF3BQ9BZI7 GUCY1B2-204ENST00000531898 1979 ntBASIC7.59□□□□□ -1.2
UPF3BQ9BZI7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 SNORD8-201ENST00000363915 110 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 RNU1-84P-201ENST00000365447 164 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 RNA5SP155-201ENST00000411154 129 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 TMA16P2-201ENST00000413187 601 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC092601.1-201ENST00000444526 383 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 COX6B1P4-201ENST00000519826 484 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 TPRX1P1-201ENST00000557620 319 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 MIR6085-201ENST00000618314 110 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 MIR7854-201ENST00000620068 65 ntBASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UPF3BQ9BZI7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC217777.1-201ENST00000570034 1471 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AL353763.1-201ENST00000624467 1628 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 RNA5SP350-201ENST00000363298 111 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 RNA5SP478-201ENST00000364657 115 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC103563.5-201ENST00000455643 364 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC018645.1-201ENST00000505003 109 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC011853.1-201ENST00000518911 454 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC009729.1-201ENST00000548873 1133 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC103968.1-201ENST00000557841 573 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 RN7SL230P-201ENST00000580835 303 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 PRELID3BP3-201ENST00000584963 545 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC012175.1-201ENST00000603755 531 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AL137246.2-201ENST00000613439 662 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 MIR6071-201ENST00000616741 78 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 AP003486.1-201ENST00000525716 3994 ntBASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
UPF3BQ9BZI7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC074141.1-201ENST00000588129 2995 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms