Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 NMD3P2-201ENST00000421815 761 ntBASIC10.19□□□□□ -0.78
TOPBP1Q92547 CCNB1IP1P1-201ENST00000428976 839 ntBASIC10.19□□□□□ -0.78
TOPBP1Q92547 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 AC115223.1-201ENST00000466377 870 ntBASIC10.19□□□□□ -0.78
TOPBP1Q92547 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TOPBP1Q92547 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
TOPBP1Q92547 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC005839.1-201ENST00000624148 3213 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC021074.2-201ENST00000468434 172 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 RNU6-615P-201ENST00000516065 106 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 SNORA43.3-201ENST00000517240 103 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 AL445222.1-201ENST00000607259 628 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC10.18□□□□□ -0.78
TOPBP1Q92547 FLJ42393-201ENST00000623801 2270 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC025470.1-201ENST00000510053 2032 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 AC009120.2-204ENST00000621548 2032 ntBASIC10.18□□□□□ -0.78
TOPBP1Q92547 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOPBP1Q92547 RN7SKP273-201ENST00000411392 314 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC092967.1-201ENST00000449016 481 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 RN7SL222P-201ENST00000476452 299 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 RN7SL547P-201ENST00000490793 290 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 Mico1.1-201ENST00000611698 204 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC105114.1-201ENST00000624795 1862 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 RN7SKP125-201ENST00000410481 302 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AL445928.1-201ENST00000435545 222 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC091685.2-201ENST00000454924 864 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 RPL35AP19-201ENST00000469425 329 ntBASIC10.17□□□□□ -0.78
TOPBP1Q92547 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC10.17□□□□□ -0.78
TOPBP1Q92547 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOPBP1Q92547 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TOPBP1Q92547 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TOPBP1Q92547 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TOPBP1Q92547 AC103591.2-201ENST00000265259 766 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 EEF1A1P29-201ENST00000416082 1096 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TOPBP1Q92547 AL139148.1-201ENST00000427122 680 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 OR7E157P-201ENST00000494376 911 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 AC024558.1-201ENST00000505008 528 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 HIGD1AP14-201ENST00000507617 282 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms