Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 SNORD16-201ENST00000362803 99 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 SNORD8-201ENST00000363915 110 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 RNA5SP478-201ENST00000364657 115 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AP003170.5-201ENST00000397185 335 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC083862.1-201ENST00000427378 1242 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL645939.3-201ENST00000435408 225 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 WDR82P2-201ENST00000444540 928 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL445991.1-201ENST00000450381 475 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL034369.1-201ENST00000453808 477 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC063955.1-201ENST00000462872 685 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC022730.1-201ENST00000473114 568 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 RPS4XP17-201ENST00000479057 754 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 RN7SL413P-201ENST00000482700 297 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 RN7SKP67-201ENST00000515905 235 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL161912.4-201ENST00000623889 2468 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AL353743.3-201ENST00000442109 1468 ntBASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TTC9CQ8N5M4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 RNU1-84P-201ENST00000365447 164 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 SNORA70H-201ENST00000383910 135 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 SNORA70J-201ENST00000384182 135 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 SNORD94-201ENST00000386037 137 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 RN7SKP221-201ENST00000410420 301 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 U3.43-201ENST00000410734 213 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AL157884.1-201ENST00000424561 454 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 NPM1P25-201ENST00000429734 854 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 GAPDHP37-201ENST00000442317 968 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 OR13K1P-201ENST00000444577 975 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 RN7SL502P-201ENST00000481857 290 ntBASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
TTC9CQ8N5M4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms