Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 SNORA11.6-201ENST00000619030 128 ntBASIC7.69□□□□□ -1.18
RNF43Q68DV7 Z69908.1-201ENST00000622603 247 ntBASIC7.69□□□□□ -1.18
RNF43Q68DV7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AC090897.3-201ENST00000636973 1157 ntBASIC7.69□□□□□ -1.18
RNF43Q68DV7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AL390237.1-201ENST00000404226 1415 ntBASIC7.69□□□□□ -1.18
RNF43Q68DV7 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 AL031651.1-201ENST00000615357 1438 ntBASIC7.69□□□□□ -1.18
RNF43Q68DV7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF43Q68DV7 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RNF43Q68DV7 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC007923.2-201ENST00000584218 1591 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC127024.8-201ENST00000623719 2094 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 RNU6-1283P-201ENST00000365314 105 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 SOD1P1-201ENST00000407803 440 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC009362.1-201ENST00000427253 406 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 MTCO2P19-201ENST00000427513 598 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 ISCA1P2-201ENST00000438679 421 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL136455.1-201ENST00000441083 1240 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 SNORA35.1-201ENST00000458908 128 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 CABYRP1-201ENST00000465493 1045 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 RN7SL705P-201ENST00000481678 294 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 RN7SL332P-201ENST00000482163 254 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 RN7SL205P-201ENST00000490174 284 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC008040.4-201ENST00000494834 768 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 RNU6-1129P-201ENST00000515964 104 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC006116.6-201ENST00000593258 1103 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC002069.2-201ENST00000603580 883 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AP000811.1-201ENST00000603803 651 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AP001330.5-201ENST00000607176 411 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AP002360.3-201ENST00000607673 710 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC012510.1-201ENST00000607946 759 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL121583.1-201ENST00000612444 682 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 MIR6889-201ENST00000613185 59 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 U6atac.1-201ENST00000616025 117 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AC005702.3-201ENST00000585345 1447 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 AL590065.1-201ENST00000603371 4774 ntBASIC7.68□□□□□ -1.18
RNF43Q68DV7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF43Q68DV7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.68□□□□□ -1.18
RNF43Q68DV7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms