Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC011379.1-201ENST00000508713 3025 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 AC005332.9-201ENST00000620266 2921 ntBASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM1Q2M3G4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 HSPD1P9-201ENST00000420325 1636 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC010624.4-201ENST00000597606 1351 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 SETP20-201ENST00000457046 852 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 SNORA58-201ENST00000505219 137 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AP001858.2-201ENST00000536213 601 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC092332.1-201ENST00000563684 829 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 FAM27E2-201ENST00000619668 403 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 AC129915.3-201ENST00000634128 948 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 CUBNP3-201ENST00000457461 1784 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.38□□□□□ -1.23
SHROOM1Q2M3G4 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 RNFT1P3-201ENST00000340898 1052 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC008171.1-201ENST00000395058 200 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 PPIAP20-201ENST00000449839 135 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC098847.1-201ENST00000473094 348 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 RN7SL326P-201ENST00000477493 296 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 RN7SL705P-201ENST00000481678 294 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC114781.3-201ENST00000512083 142 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 CR383658.1-201ENST00000514609 734 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 IGLVIV-64-201ENST00000518581 301 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC010998.3-201ENST00000613871 631 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AL157831.2-201ENST00000564681 3095 ntBASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM1Q2M3G4 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.36□□□□□ -1.23
SHROOM1Q2M3G4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms