Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC019050.1-201ENST00000418508 492 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AC073648.4-201ENST00000442655 781 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC234781.3-201ENST00000452540 973 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC092824.1-201ENST00000483524 576 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 SNORA58-201ENST00000505219 137 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC009962.1-201ENST00000567327 3813 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 SS18L2P2-201ENST00000583960 235 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AC010327.2-201ENST00000587647 488 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 MIR6780A-201ENST00000615089 68 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AC012414.7-202ENST00000622705 1090 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 HSPA8P14-201ENST00000552265 1805 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 MFSD8-217ENST00000641178 4374 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.24□□□□□ -1.73
PRKDCP78527 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC141002.1-201ENST00000607025 279 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 AC000068.2-201ENST00000608816 460 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PRKDCP78527 AC091046.3-201ENST00000631455 1574 ntBASIC4.24□□□□□ -1.73
PRKDCP78527 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRKDCP78527 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRKDCP78527 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 AC005332.9-201ENST00000620266 2921 ntBASIC4.23□□□□□ -1.73
PRKDCP78527 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PRKDCP78527 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKDCP78527 AC009237.1-201ENST00000442127 744 ntBASIC4.23□□□□□ -1.73
PRKDCP78527 AC015864.1-201ENST00000496512 544 ntBASIC4.23□□□□□ -1.73
PRKDCP78527 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKDCP78527 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKDCP78527 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC4.23□□□□□ -1.73
PRKDCP78527 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 AC062022.1-201ENST00000451026 1684 ntBASIC4.23□□□□□ -1.73
PRKDCP78527 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
PRKDCP78527 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRKDCP78527 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms