Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
CLDN18P56856 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AP004289.1-201ENST00000436307 2205 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AKAP17BP-201ENST00000431706 2719 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 RNA5SP514-201ENST00000363717 111 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AL050335.1-201ENST00000396909 869 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AL157702.1-201ENST00000398764 426 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 YWHAZP6-201ENST00000399764 738 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 NME1P1-201ENST00000420914 382 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN18P56856 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.74□□□□□ -1.49
CLDN18P56856 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN18P56856 CXCR2P1-202ENST00000443392 1074 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AC068491.1-201ENST00000449539 1241 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN18P56856 RN7SL643P-201ENST00000471845 291 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AC128716.1-201ENST00000475129 166 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AC092824.1-201ENST00000483524 576 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN18P56856 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN18P56856 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN18P56856 Vault.2-201ENST00000516519 98 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 RNA5SP441-201ENST00000516809 88 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 SNORA81.2-201ENST00000516868 170 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 IGHV4-55-201ENST00000520889 368 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN18P56856 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CLDN18P56856 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN18P56856 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN18P56856 SMIM12P1-201ENST00000603004 274 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN18P56856 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.74□□□□□ -1.49
CLDN18P56856 MIR6721-201ENST00000617181 87 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 CASC19-274ENST00000642018 970 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.74□□□□□ -1.49
CLDN18P56856 AL132656.3-201ENST00000606384 1595 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 AL136984.1-201ENST00000607611 1893 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 RPS2P45-201ENST00000469997 2057 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.74□□□□□ -1.49
CLDN18P56856 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLDN18P56856 AC013488.1-201ENST00000526618 1838 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.74□□□□□ -1.49
CLDN18P56856 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 LCOR-201ENST00000286067 4542 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 RBBP4P5-201ENST00000398583 1266 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN18P56856 AC093166.3-201ENST00000448785 303 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN18P56856 CTSLP6-201ENST00000458273 1002 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 RN7SL369P-201ENST00000477138 299 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CLDN18P56856 RPL12P31-201ENST00000478433 450 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC122718.2-201ENST00000505325 591 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC091874.2-201ENST00000505889 720 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN18P56856 ZNF519P4-201ENST00000514008 125 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN18P56856 RNA5SP206-201ENST00000516703 121 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 IGKV1D-22-201ENST00000518953 324 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 COX6B1P4-201ENST00000519826 484 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC084337.1-201ENST00000524809 686 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN18P56856 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN18P56856 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.73□□□□□ -1.49
CLDN18P56856 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLDN18P56856 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 282.8 ms