Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 AC009729.1-201ENST00000548873 1133 ntBASIC4.74□□□□□ -1.65
CMC4P56277 AC121758.1-202ENST00000556917 658 ntBASIC4.74□□□□□ -1.65
CMC4P56277 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.74□□□□□ -1.65
CMC4P56277 AC011500.1-201ENST00000601963 469 ntBASIC4.74□□□□□ -1.65
CMC4P56277 CYCSP1-201ENST00000604815 315 ntBASIC4.74□□□□□ -1.65
CMC4P56277 AL008582.1-201ENST00000609612 442 ntBASIC4.74□□□□□ -1.65
CMC4P56277 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
CMC4P56277 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.74□□□□□ -1.65
CMC4P56277 AC012676.3-201ENST00000614983 479 ntBASIC4.74□□□□□ -1.65
CMC4P56277 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.74□□□□□ -1.65
CMC4P56277 AC116667.2-201ENST00000641075 823 ntBASIC4.74□□□□□ -1.65
CMC4P56277 CASC19-274ENST00000642018 970 ntBASIC4.74□□□□□ -1.65
CMC4P56277 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.74□□□□□ -1.65
CMC4P56277 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
CMC4P56277 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.74□□□□□ -1.65
CMC4P56277 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 PABPC1P8-201ENST00000452851 2086 ntBASIC4.74□□□□□ -1.65
CMC4P56277 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CMC4P56277 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CMC4P56277 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC4.74□□□□□ -1.65
CMC4P56277 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CMC4P56277 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 NEK2P2-201ENST00000438441 1338 ntBASIC4.73□□□□□ -1.65
CMC4P56277 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CMC4P56277 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CMC4P56277 RPL12P23-201ENST00000405880 490 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 THEM7P-201ENST00000419556 672 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 TIMM8BP2-201ENST00000445940 251 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC093166.3-201ENST00000448785 303 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 RPL7L1P3-201ENST00000455249 689 ntBASIC4.73□□□□□ -1.65
CMC4P56277 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 RN7SL369P-201ENST00000477138 299 ntBASIC4.73□□□□□ -1.65
CMC4P56277 RPL12P31-201ENST00000478433 450 ntBASIC4.73□□□□□ -1.65
CMC4P56277 RPL17P2-201ENST00000491913 451 ntBASIC4.73□□□□□ -1.65
CMC4P56277 EIF4E2P2-201ENST00000492033 736 ntBASIC4.73□□□□□ -1.65
CMC4P56277 RN7SL649P-201ENST00000496974 275 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.73□□□□□ -1.65
CMC4P56277 NPIPB14P-203ENST00000532298 987 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 AC073916.1-201ENST00000545095 130 ntBASIC4.73□□□□□ -1.65
CMC4P56277 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 AC002519.2-203ENST00000567043 837 ntBASIC4.73□□□□□ -1.65
CMC4P56277 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 AC005332.4-201ENST00000592752 579 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC063977.7-201ENST00000594454 337 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.73□□□□□ -1.65
CMC4P56277 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 AC015819.1-201ENST00000613588 663 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 OR7E91P-202ENST00000642062 1198 ntBASIC4.73□□□□□ -1.65
CMC4P56277 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CMC4P56277 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC4.73□□□□□ -1.65
CMC4P56277 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.73□□□□□ -1.65
CMC4P56277 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.73□□□□□ -1.65
CMC4P56277 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CMC4P56277 AL136984.1-201ENST00000607611 1893 ntBASIC4.73□□□□□ -1.65
CMC4P56277 AKAP17BP-201ENST00000431706 2719 ntBASIC4.73□□□□□ -1.65
CMC4P56277 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CMC4P56277 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CMC4P56277 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CMC4P56277 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC4.72□□□□□ -1.65
CMC4P56277 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC4.72□□□□□ -1.65
CMC4P56277 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CMC4P56277 TNPO1P2-201ENST00000426249 2665 ntBASIC4.72□□□□□ -1.65
CMC4P56277 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CMC4P56277 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.72□□□□□ -1.65
CMC4P56277 CASC19-246ENST00000641625 1606 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms