Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC073916.1-201ENST00000545095 130 ntBASIC6.58□□□□□ -1.36
HTTP42858 AC015720.2-201ENST00000567709 334 ntBASIC6.58□□□□□ -1.36
HTTP42858 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.58□□□□□ -1.36
HTTP42858 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 AL118522.2-201ENST00000616045 615 ntBASIC6.58□□□□□ -1.36
HTTP42858 AP004289.1-201ENST00000436307 2205 ntBASIC6.58□□□□□ -1.36
HTTP42858 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.58□□□□□ -1.36
HTTP42858 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
HTTP42858 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.57□□□□□ -1.36
HTTP42858 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HTTP42858 AC006466.1-201ENST00000438721 289 ntBASIC6.57□□□□□ -1.36
HTTP42858 AC073594.1-201ENST00000462065 364 ntBASIC6.57□□□□□ -1.36
HTTP42858 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.57□□□□□ -1.36
HTTP42858 AC073610.1-201ENST00000489971 396 ntBASIC6.57□□□□□ -1.36
HTTP42858 AP000662.1-201ENST00000530952 487 ntBASIC6.57□□□□□ -1.36
HTTP42858 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.57□□□□□ -1.36
HTTP42858 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.57□□□□□ -1.36
HTTP42858 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 GOLGA8CP-201ENST00000446144 5237 ntBASIC6.57□□□□□ -1.36
HTTP42858 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.57□□□□□ -1.36
HTTP42858 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 AL049745.1-201ENST00000433953 286 ntBASIC6.57□□□□□ -1.36
HTTP42858 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.57□□□□□ -1.36
HTTP42858 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
HTTP42858 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HTTP42858 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC6.57□□□□□ -1.36
HTTP42858 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.56□□□□□ -1.36
HTTP42858 SDC4P-201ENST00000453285 601 ntBASIC6.56□□□□□ -1.36
HTTP42858 AC096741.1-201ENST00000472250 846 ntBASIC6.56□□□□□ -1.36
HTTP42858 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
HTTP42858 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.56□□□□□ -1.36
HTTP42858 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.56□□□□□ -1.36
HTTP42858 AC091953.3-201ENST00000623220 236 ntBASIC6.56□□□□□ -1.36
HTTP42858 MAPK10-350ENST00000641777 965 ntBASIC6.56□□□□□ -1.36
HTTP42858 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
HTTP42858 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HTTP42858 AC084337.1-201ENST00000524809 686 ntBASIC6.56□□□□□ -1.36
HTTP42858 AL023583.1-201ENST00000607518 1143 ntBASIC6.56□□□□□ -1.36
HTTP42858 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.56□□□□□ -1.36
HTTP42858 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
HTTP42858 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.56□□□□□ -1.36
HTTP42858 RPL7L1P9-201ENST00000431298 745 ntBASIC6.56□□□□□ -1.36
HTTP42858 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.56□□□□□ -1.36
HTTP42858 RN7SL385P-201ENST00000468873 276 ntBASIC6.56□□□□□ -1.36
HTTP42858 SNRPCP2-201ENST00000504370 475 ntBASIC6.56□□□□□ -1.36
HTTP42858 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.56□□□□□ -1.36
HTTP42858 AC006116.3-201ENST00000592968 361 ntBASIC6.56□□□□□ -1.36
HTTP42858 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.56□□□□□ -1.36
HTTP42858 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HTTP42858 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.55□□□□□ -1.36
HTTP42858 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms