Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.19□□□□□ -1.26
COL8A1P27658 AL844908.1-201ENST00000609953 652 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 AL132822.1-201ENST00000617063 513 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 7SK.10-201ENST00000621414 298 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 AC073348.1-201ENST00000623002 331 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 AP003068.4-201ENST00000623192 802 ntBASIC7.19□□□□□ -1.26
COL8A1P27658 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC7.19□□□□□ -1.26
COL8A1P27658 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
COL8A1P27658 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC7.19□□□□□ -1.26
COL8A1P27658 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC7.19□□□□□ -1.26
COL8A1P27658 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.19□□□□□ -1.26
COL8A1P27658 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
COL8A1P27658 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
COL8A1P27658 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 MTND5P16-201ENST00000460269 1703 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 AL353132.1-201ENST00000415260 2043 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 AC107398.3-201ENST00000562284 7000 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC7.18□□□□□ -1.26
COL8A1P27658 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.18□□□□□ -1.26
COL8A1P27658 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 OR2M1P-201ENST00000318104 951 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 SNORA58.1-201ENST00000364133 136 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 RNU6-534P-201ENST00000364877 106 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 RNU6-1005P-201ENST00000384519 107 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 ATF1P1-201ENST00000406040 927 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
COL8A1P27658 RN7SKP56-201ENST00000410513 331 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.18□□□□□ -1.26
COL8A1P27658 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.18□□□□□ -1.26
COL8A1P27658 PPIL1P1-201ENST00000423936 499 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 GAPDHP69-201ENST00000425504 1008 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 ELOCP14-201ENST00000428070 331 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 ELOCP7-201ENST00000439968 331 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC108039.2-201ENST00000440214 359 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 NUTF2P4-201ENST00000458353 381 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 UBTFL6-201ENST00000477929 1024 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC092349.1-201ENST00000504903 310 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC073358.1-201ENST00000505671 684 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC107385.1-201ENST00000507985 778 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC096661.1-201ENST00000515870 822 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 RNA5SP101-201ENST00000517036 108 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 AP000445.1-201ENST00000526692 741 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.18□□□□□ -1.26
COL8A1P27658 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.18□□□□□ -1.26
COL8A1P27658 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.18□□□□□ -1.26
COL8A1P27658 AC006116.10-201ENST00000591836 581 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 VN1R81P-201ENST00000602085 372 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC022239.4-201ENST00000602626 504 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 MTCO3P22-201ENST00000603219 784 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AC069304.2-201ENST00000605154 435 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 AP001521.2-201ENST00000608772 546 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL8A1P27658 AL359535.1-201ENST00000612100 1087 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 MIR7150-201ENST00000614393 94 ntBASIC7.18□□□□□ -1.26
COL8A1P27658 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms