Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AC018645.1-201ENST00000505003 109 ntBASIC6.48□□□□□ -1.37
HLA-DPA1P20036 COX6B1P4-201ENST00000519826 484 ntBASIC6.48□□□□□ -1.37
HLA-DPA1P20036 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 MIR4732-201ENST00000581873 76 ntBASIC6.48□□□□□ -1.37
HLA-DPA1P20036 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AC011497.2-201ENST00000600255 639 ntBASIC6.48□□□□□ -1.37
HLA-DPA1P20036 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AC008957.3-201ENST00000624112 2242 ntBASIC6.48□□□□□ -1.37
HLA-DPA1P20036 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HLA-DPA1P20036 AL353743.3-201ENST00000442109 1468 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC119674.1-213ENST00000641177 1386 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 RNA5SP85-201ENST00000365378 119 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 RN7SKP281-201ENST00000410472 352 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 GPN3P1-201ENST00000423883 535 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL157884.1-201ENST00000424561 454 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 GAPDHP19-201ENST00000431768 1005 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 RPL12P49-201ENST00000441100 121 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC002075.1-201ENST00000457396 676 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC093664.1-201ENST00000511779 289 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AP005639.1-201ENST00000526939 192 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL121579.2-201ENST00000555466 590 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC037479.1-201ENST00000558361 625 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC137695.1-201ENST00000604126 489 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CR383656.5-201ENST00000547616 1340 ntBASIC6.47□□□□□ -1.37
HLA-DPA1P20036 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.47□□□□□ -1.37
HLA-DPA1P20036 CUBNP3-201ENST00000457461 1784 ntBASIC6.46□□□□□ -1.37
HLA-DPA1P20036 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HLA-DPA1P20036 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
HLA-DPA1P20036 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.46□□□□□ -1.37
HLA-DPA1P20036 CASC19-243ENST00000641588 1546 ntBASIC6.46□□□□□ -1.37
HLA-DPA1P20036 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
HLA-DPA1P20036 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.46□□□□□ -1.37
HLA-DPA1P20036 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 SNORD35A-201ENST00000363389 86 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 RPL36P18-201ENST00000419316 318 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 OR6R1P-201ENST00000431838 940 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AL354893.1-201ENST00000433735 348 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC128677.1-201ENST00000436016 442 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AC013403.1-201ENST00000436954 263 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 AL355355.1-201ENST00000442900 793 ntBASIC6.46□□□□□ -1.38
HLA-DPA1P20036 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.46□□□□□ -1.38
HLA-DPA1P20036 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms