Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 LINC01613-201ENST00000561476 2780 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UBE4BO95155 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBE4BO95155 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
UBE4BO95155 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBE4BO95155 OR11H13P-201ENST00000359695 979 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 MIR433-201ENST00000384837 93 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
UBE4BO95155 AL445238.1-204ENST00000400311 463 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 AC116036.1-201ENST00000412199 367 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 NPM1P36-201ENST00000415681 835 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 OSTCP4-201ENST00000424397 449 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 CLNS1AP1-201ENST00000435954 682 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.93□□□□□ -1.3
UBE4BO95155 KF459542.1-201ENST00000450908 553 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 RANP2-201ENST00000456833 229 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 RPS7P10-201ENST00000464254 603 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 RPL12P31-201ENST00000478433 450 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.93□□□□□ -1.3
UBE4BO95155 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.93□□□□□ -1.3
UBE4BO95155 RNA5SP116-201ENST00000516132 98 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.93□□□□□ -1.3
UBE4BO95155 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 AC138207.8-204ENST00000579588 527 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.93□□□□□ -1.3
UBE4BO95155 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.93□□□□□ -1.3
UBE4BO95155 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 AL589863.1-201ENST00000595383 631 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.93□□□□□ -1.3
UBE4BO95155 AL021368.3-201ENST00000607119 578 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.93□□□□□ -1.3
UBE4BO95155 AC006924.1-201ENST00000610750 559 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 AC007603.3-201ENST00000636915 979 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.93□□□□□ -1.3
UBE4BO95155 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.93□□□□□ -1.3
UBE4BO95155 AC011504.1-201ENST00000623331 4103 ntBASIC6.93□□□□□ -1.3
UBE4BO95155 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBE4BO95155 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
UBE4BO95155 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UBE4BO95155 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 CASC19-246ENST00000641625 1606 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
UBE4BO95155 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
UBE4BO95155 RN7SKP121-201ENST00000410842 305 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.92□□□□□ -1.3
UBE4BO95155 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 RPL24P2-201ENST00000421023 475 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC092601.1-201ENST00000444526 383 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 POU5F1P5-201ENST00000445059 658 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 RPS27AP3-201ENST00000453803 454 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC044810.1-201ENST00000480271 711 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC117500.1-201ENST00000497352 755 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 OR4A40P-201ENST00000533878 948 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC027229.1-201ENST00000583887 253 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC063977.7-201ENST00000594454 337 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 MIR6780B-201ENST00000610307 79 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AC010998.3-201ENST00000613871 631 ntBASIC6.92□□□□□ -1.3
UBE4BO95155 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.92□□□□□ -1.3
UBE4BO95155 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.92□□□□□ -1.3
UBE4BO95155 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UBE4BO95155 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
UBE4BO95155 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
UBE4BO95155 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UBE4BO95155 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
UBE4BO95155 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms