Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 AC073464.1-201ENST00000429823 534 ntBASIC8.93□□□□□ -0.98
RNF40O75150 CTBP2P1-201ENST00000431853 245 ntBASIC8.93□□□□□ -0.98
RNF40O75150 RPSAP53-201ENST00000433498 862 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.93□□□□□ -0.98
RNF40O75150 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 MTND1P16-201ENST00000465177 898 ntBASIC8.93□□□□□ -0.98
RNF40O75150 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 RPL7P24-201ENST00000493052 752 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC068531.1-201ENST00000502398 195 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.93□□□□□ -0.98
RNF40O75150 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 SNRPCP14-201ENST00000524498 205 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC8.93□□□□□ -0.98
RNF40O75150 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.93□□□□□ -0.98
RNF40O75150 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 GTF2IP22-201ENST00000554443 182 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 AC009220.3-201ENST00000604318 586 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 AL359880.1-201ENST00000621879 266 ntBASIC8.93□□□□□ -0.98
RNF40O75150 MIR6807-201ENST00000621968 92 ntBASIC8.93□□□□□ -0.98
RNF40O75150 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 AL121785.1-201ENST00000624745 708 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AC120349.2-201ENST00000625002 298 ntBASIC8.93□□□□□ -0.98
RNF40O75150 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 MFSD8-245ENST00000641743 948 ntBASIC8.93□□□□□ -0.98
RNF40O75150 AL139254.2-202ENST00000641937 1156 ntBASIC8.93□□□□□ -0.98
RNF40O75150 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.93□□□□□ -0.98
RNF40O75150 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.93□□□□□ -0.98
RNF40O75150 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
RNF40O75150 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RNF40O75150 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
RNF40O75150 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.92□□□□□ -0.98
RNF40O75150 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 PABPC1P9-201ENST00000426076 1612 ntBASIC8.92□□□□□ -0.98
RNF40O75150 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 AL022578.1-201ENST00000439330 1433 ntBASIC8.92□□□□□ -0.98
RNF40O75150 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 RN7SKP37-201ENST00000364494 296 ntBASIC8.92□□□□□ -0.98
RNF40O75150 CREM-213ENST00000374734 711 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
RNF40O75150 RNU6-780P-201ENST00000391030 104 ntBASIC8.92□□□□□ -0.98
RNF40O75150 AC093719.1-202ENST00000392735 373 ntBASIC8.92□□□□□ -0.98
RNF40O75150 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 RNA5SP80-201ENST00000410475 111 ntBASIC8.92□□□□□ -0.98
RNF40O75150 RNU6-248P-201ENST00000410720 107 ntBASIC8.92□□□□□ -0.98
RNF40O75150 RN7SKP136-201ENST00000410927 300 ntBASIC8.92□□□□□ -0.98
RNF40O75150 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 MTCO3P12-201ENST00000416718 547 ntBASIC8.92□□□□□ -0.98
RNF40O75150 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 MTCO2P12-201ENST00000427426 682 ntBASIC8.92□□□□□ -0.98
RNF40O75150 AC068137.1-201ENST00000429272 584 ntBASIC8.92□□□□□ -0.98
RNF40O75150 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RNF40O75150 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC8.92□□□□□ -0.98
RNF40O75150 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.92□□□□□ -0.98
RNF40O75150 EMC3-AS1-205ENST00000438698 534 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms