Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.14■■■□□ 2.42
CDC42BPBQ9Y5S2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
CDC42BPBQ9Y5S2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.41
CDC42BPBQ9Y5S2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CDC42BPBQ9Y5S2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 MFAP1P1-201ENST00000442257 1255 ntBASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 AC131212.4-201ENST00000623606 975 ntBASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 AL117328.2-201ENST00000624617 1940 ntBASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 UPK3BP1-201ENST00000428678 509 ntBASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CDC42BPBQ9Y5S2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDC42BPBQ9Y5S2 AC007663.1-201ENST00000438948 1240 ntBASIC30.11■■■□□ 2.41
CDC42BPBQ9Y5S2 AC091390.4-202ENST00000476426 537 ntBASIC30.11■■■□□ 2.41
CDC42BPBQ9Y5S2 Z85996.1-201ENST00000494644 937 ntBASIC30.11■■■□□ 2.41
CDC42BPBQ9Y5S2 AP000692.2-201ENST00000608391 879 ntBASIC30.11■■■□□ 2.41
CDC42BPBQ9Y5S2 AC011298.2-201ENST00000617989 482 ntBASIC30.11■■■□□ 2.41
CDC42BPBQ9Y5S2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDC42BPBQ9Y5S2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 SLC25A1P4-201ENST00000567977 778 ntBASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CDC42BPBQ9Y5S2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC30.08■■■□□ 2.41
CDC42BPBQ9Y5S2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 AC004951.3-201ENST00000418645 1148 ntBASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 FAM207BP-201ENST00000447172 505 ntBASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
CDC42BPBQ9Y5S2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 FP700111.2-201ENST00000619190 1892 ntBASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDC42BPBQ9Y5S2 AC008040.2-201ENST00000461049 708 ntBASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms