Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 AC026185.1-201ENST00000445748 174 ntBASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 AC116562.4-201ENST00000641316 2276 ntBASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
TNPO3Q9Y5L0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 CDCA4P2-201ENST00000441182 718 ntBASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 AC105036.2-201ENST00000569468 176 ntBASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNPO3Q9Y5L0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNPO3Q9Y5L0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 GPX1P1-201ENST00000388829 606 ntBASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNPO3Q9Y5L0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNPO3Q9Y5L0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNPO3Q9Y5L0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNPO3Q9Y5L0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms