Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 KRASP1-201ENST00000407852 552 ntBASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN16Q9Y5I7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN16Q9Y5I7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AL158047.1-201ENST00000445918 881 ntBASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 PRKY-204ENST00000533551 1019 ntBASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AC110285.5-201ENST00000611501 352 ntBASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 NBPF21P-201ENST00000425093 1451 ntBASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN16Q9Y5I7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 TMEM179-206ENST00000616017 1645 ntBASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CLDN16Q9Y5I7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN16Q9Y5I7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN16Q9Y5I7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CLDN16Q9Y5I7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms