Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.82■□□□□ 0.12
LSM4Q9Y4Z0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 AC068338.2-201ENST00000563278 1430 ntBASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LSM4Q9Y4Z0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 MIPEPP3-201ENST00000412105 444 ntBASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 POU5F1P3-201ENST00000428824 1078 ntBASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 AC007322.4-201ENST00000509611 723 ntBASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.8■□□□□ 0.12
LSM4Q9Y4Z0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 AC004408.2-201ENST00000623613 2777 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 AC091799.1-201ENST00000422823 811 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 AC008687.6-201ENST00000596318 630 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 AC243732.1-201ENST00000612648 864 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 ITM2C-210ENST00000620962 501 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 OR10C1-204ENST00000622521 1039 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 Z82202.1-201ENST00000623446 1880 ntBASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LSM4Q9Y4Z0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 CYP2T1P-201ENST00000432607 1285 ntBASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms