Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
MACF1Q9UPN3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 AP000523.1-201ENST00000398242 1049 ntBASIC8.21□□□□□ -1.09
MACF1Q9UPN3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 AC063926.2-201ENST00000623766 1308 ntBASIC8.21□□□□□ -1.09
MACF1Q9UPN3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC8.21□□□□□ -1.09
MACF1Q9UPN3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 NMU-202ENST00000505262 693 ntTSL 3 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
MACF1Q9UPN3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC190387.1-201ENST00000551683 408 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 RCC2P6-201ENST00000526625 1557 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CCDC74BP1-201ENST00000508880 1123 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 NEK4P2-201ENST00000580004 1012 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 DUX4L17-201ENST00000557360 1267 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 RASA4DP-201ENST00000460726 1199 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 RPL13AP23-201ENST00000480739 586 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC116050.2-201ENST00000612102 1779 ntBASIC8.2□□□□□ -1.1
MACF1Q9UPN3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MACF1Q9UPN3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms