Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN2Q9UHD9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 PBX2P1-201ENST00000493219 1291 ntBASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 AL136162.1-201ENST00000607711 1078 ntBASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 AC110285.6-201ENST00000617652 491 ntBASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN2Q9UHD9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 AC139713.2-201ENST00000641328 2723 ntBASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 AC092720.2-201ENST00000602388 1665 ntBASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 AL139246.5-201ENST00000606645 996 ntBASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN2Q9UHD9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 SERBP1P1-201ENST00000396021 1160 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 DUX4L19-201ENST00000557448 1267 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 pRNA.6-201ENST00000610482 90 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 pRNA.5-201ENST00000612139 90 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 pRNA.11-201ENST00000618423 90 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 pRNA.13-201ENST00000619112 90 ntBASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
UBQLN2Q9UHD9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms