Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTSFQ9UBX1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTSFQ9UBX1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
CTSFQ9UBX1 AC116351.2-201ENST00000606540 1585 ntBASIC18.64■□□□□ 0.58
CTSFQ9UBX1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AC113410.3-201ENST00000623366 203 ntBASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 HTR7P1-201ENST00000538670 1336 ntBASIC18.64■□□□□ 0.57
CTSFQ9UBX1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AP005212.1-201ENST00000581547 1997 ntBASIC18.64■□□□□ 0.57
CTSFQ9UBX1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTSFQ9UBX1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 AC004264.1-201ENST00000608354 794 ntBASIC18.63■□□□□ 0.57
CTSFQ9UBX1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 AC018553.1-201ENST00000616682 1458 ntBASIC18.63■□□□□ 0.57
CTSFQ9UBX1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.63■□□□□ 0.57
CTSFQ9UBX1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 AP001412.1-201ENST00000608405 714 ntBASIC18.62■□□□□ 0.57
CTSFQ9UBX1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 BX119927.1-201ENST00000636596 1552 ntBASIC18.62■□□□□ 0.57
CTSFQ9UBX1 PHGDH-210ENST00000641115 1638 ntBASIC18.62■□□□□ 0.57
CTSFQ9UBX1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSFQ9UBX1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 AL512408.1-201ENST00000569378 2000 ntBASIC18.61■□□□□ 0.57
CTSFQ9UBX1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.61■□□□□ 0.57
CTSFQ9UBX1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms