Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRIT1Q9P2V4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 NIFKP9-201ENST00000419265 221 ntBASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 KSR1P1-201ENST00000446298 240 ntBASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRIT1Q9P2V4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 AC116351.2-201ENST00000606540 1585 ntBASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 AC097493.4-201ENST00000641197 219 ntBASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LRIT1Q9P2V4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 TFP1-202ENST00000475455 1573 ntBASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 UNC93B2-201ENST00000285383 730 ntBASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 AC018553.1-201ENST00000616682 1458 ntBASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LRIT1Q9P2V4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 RBM17P1-201ENST00000453646 1190 ntBASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 AC012306.2-201ENST00000609350 630 ntBASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 KRT16P1-201ENST00000399124 1418 ntBASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.14■□□□□ 0.65
LRIT1Q9P2V4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 MIR1224-201ENST00000408193 85 ntBASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.13■□□□□ 0.65
LRIT1Q9P2V4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms