Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 AC124283.5-201ENST00000624661 1809 ntBASIC18.35■□□□□ 0.53
HPF1Q9NWY4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 AL121829.2-201ENST00000620908 328 ntBASIC18.34■□□□□ 0.53
HPF1Q9NWY4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPF1Q9NWY4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.33■□□□□ 0.53
HPF1Q9NWY4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 KRASP1-201ENST00000407852 552 ntBASIC18.33■□□□□ 0.52
HPF1Q9NWY4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 AC124016.1-201ENST00000609552 612 ntBASIC18.33■□□□□ 0.52
HPF1Q9NWY4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPF1Q9NWY4 KRT16P6-202ENST00000425692 1426 ntBASIC18.32■□□□□ 0.52
HPF1Q9NWY4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPF1Q9NWY4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HPF1Q9NWY4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms