Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLE3Q9NRF9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 SLC29A4P1-201ENST00000398760 971 ntBASIC18.37■□□□□ 0.53
POLE3Q9NRF9 AC073210.2-201ENST00000430369 194 ntBASIC18.37■□□□□ 0.53
POLE3Q9NRF9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLE3Q9NRF9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 PHGDH-210ENST00000641115 1638 ntBASIC18.36■□□□□ 0.53
POLE3Q9NRF9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
POLE3Q9NRF9 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
POLE3Q9NRF9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.35■□□□□ 0.53
POLE3Q9NRF9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 AL390719.1-204ENST00000412397 1219 ntBASIC18.34■□□□□ 0.53
POLE3Q9NRF9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 TSPY6P-201ENST00000448518 926 ntBASIC18.34■□□□□ 0.53
POLE3Q9NRF9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 MIR4758-201ENST00000577688 71 ntBASIC18.34■□□□□ 0.53
POLE3Q9NRF9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.34■□□□□ 0.53
POLE3Q9NRF9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.34■□□□□ 0.53
POLE3Q9NRF9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms