Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KLHL1Q9NR64 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
KLHL1Q9NR64 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KLHL1Q9NR64 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
KLHL1Q9NR64 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 POM121L13P-201ENST00000422362 380 ntBASIC18.58■□□□□ 0.56
KLHL1Q9NR64 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 AC027702.1-201ENST00000563810 1770 ntBASIC18.58■□□□□ 0.56
KLHL1Q9NR64 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
KLHL1Q9NR64 PCDHAC2-203ENST00000615316 3011 ntBASIC18.58■□□□□ 0.56
KLHL1Q9NR64 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 GABARAPL3-202ENST00000624044 1851 ntBASIC18.57■□□□□ 0.56
KLHL1Q9NR64 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.57■□□□□ 0.56
KLHL1Q9NR64 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 UBE2SP1-201ENST00000450587 669 ntBASIC18.56■□□□□ 0.56
KLHL1Q9NR64 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 RN7SL471P-201ENST00000580476 299 ntBASIC18.56■□□□□ 0.56
KLHL1Q9NR64 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
KLHL1Q9NR64 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 AL391422.3-201ENST00000603791 2761 ntBASIC18.55■□□□□ 0.56
KLHL1Q9NR64 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms