Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN4Q9NQP4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN4Q9NQP4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.46■□□□□ 0.71
PFDN4Q9NQP4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PFDN4Q9NQP4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PFDN4Q9NQP4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 AC087633.2-202ENST00000565166 1439 ntBASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PFDN4Q9NQP4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 HTR7P1-202ENST00000624664 4411 ntBASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 MIR935-201ENST00000401179 91 ntBASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 AL591742.1-201ENST00000604433 565 ntBASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.43■□□□□ 0.7
PFDN4Q9NQP4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 AL162430.1-201ENST00000480705 870 ntBASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
PFDN4Q9NQP4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms