Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM38AQ9H6F2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM38AQ9H6F2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 AC026271.2-201ENST00000428091 497 ntBASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM38AQ9H6F2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.39■□□□□ 0.54
TMEM38AQ9H6F2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM38AQ9H6F2 KRT17P1-201ENST00000399211 1546 ntBASIC18.39■□□□□ 0.54
TMEM38AQ9H6F2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TMEM38AQ9H6F2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM38AQ9H6F2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms