Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.88■□□□□ 0.77
VPS11Q9H270 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS11Q9H270 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.88■□□□□ 0.77
VPS11Q9H270 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS11Q9H270 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS11Q9H270 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS11Q9H270 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS11Q9H270 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.87■□□□□ 0.77
VPS11Q9H270 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
VPS11Q9H270 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.87■□□□□ 0.77
VPS11Q9H270 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VPS11Q9H270 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
VPS11Q9H270 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VPS11Q9H270 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.87■□□□□ 0.77
VPS11Q9H270 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.87■□□□□ 0.77
VPS11Q9H270 NTF6G-201ENST00000591094 616 ntBASIC19.87■□□□□ 0.77
VPS11Q9H270 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VPS11Q9H270 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VPS11Q9H270 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS11Q9H270 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
VPS11Q9H270 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS11Q9H270 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS11Q9H270 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 AC016405.3-201ENST00000607710 860 ntBASIC19.86■□□□□ 0.77
VPS11Q9H270 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
VPS11Q9H270 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VPS11Q9H270 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS11Q9H270 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VPS11Q9H270 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
VPS11Q9H270 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
VPS11Q9H270 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
VPS11Q9H270 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS11Q9H270 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
VPS11Q9H270 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS11Q9H270 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS11Q9H270 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS11Q9H270 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.84■□□□□ 0.77
VPS11Q9H270 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VPS11Q9H270 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.84■□□□□ 0.77
VPS11Q9H270 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS11Q9H270 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms