Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 TERC-201ENST00000602385 541 ntBASIC19.02■□□□□ 0.64
SPTBN4Q9H254 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SPTBN4Q9H254 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.02■□□□□ 0.63
SPTBN4Q9H254 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 LINC01311-201ENST00000565162 1445 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 AC093323.1-202ENST00000635031 2045 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 TPSP2-201ENST00000561760 610 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 SPDYE15P-201ENST00000424157 909 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 AC091304.2-201ENST00000564639 760 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 AL121912.1-201ENST00000603683 238 ntBASIC19.01■□□□□ 0.63
SPTBN4Q9H254 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPTBN4Q9H254 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPTBN4Q9H254 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPTBN4Q9H254 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19■□□□□ 0.63
SPTBN4Q9H254 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SPTBN4Q9H254 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPTBN4Q9H254 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19■□□□□ 0.63
SPTBN4Q9H254 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SPTBN4Q9H254 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19■□□□□ 0.63
SPTBN4Q9H254 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19■□□□□ 0.63
SPTBN4Q9H254 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SPTBN4Q9H254 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPTBN4Q9H254 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19■□□□□ 0.63
SPTBN4Q9H254 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19■□□□□ 0.63
SPTBN4Q9H254 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19■□□□□ 0.63
SPTBN4Q9H254 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 NEK4P2-201ENST00000580004 1012 ntBASIC18.99■□□□□ 0.63
SPTBN4Q9H254 AL121672.3-201ENST00000608644 468 ntBASIC18.99■□□□□ 0.63
SPTBN4Q9H254 AL691403.2-201ENST00000618460 490 ntBASIC18.99■□□□□ 0.63
SPTBN4Q9H254 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SPTBN4Q9H254 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPTBN4Q9H254 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms