Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH23Q9H251 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 AL845331.1-201ENST00000424978 1190 ntBASIC21.17■□□□□ 0.98
CDH23Q9H251 AC139530.3-201ENST00000620344 690 ntBASIC21.17■□□□□ 0.98
CDH23Q9H251 AC011484.1-201ENST00000377652 1995 ntBASIC21.17■□□□□ 0.98
CDH23Q9H251 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH23Q9H251 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH23Q9H251 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH23Q9H251 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH23Q9H251 KRT8P36-201ENST00000489121 1440 ntBASIC21.17■□□□□ 0.98
CDH23Q9H251 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDH23Q9H251 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDH23Q9H251 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH23Q9H251 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CDH23Q9H251 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH23Q9H251 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH23Q9H251 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH23Q9H251 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH23Q9H251 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 VENTXP5-201ENST00000523979 775 ntBASIC21.16■□□□□ 0.98
CDH23Q9H251 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH23Q9H251 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH23Q9H251 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH23Q9H251 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH23Q9H251 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.16■□□□□ 0.98
CDH23Q9H251 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH23Q9H251 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH23Q9H251 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH23Q9H251 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH23Q9H251 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH23Q9H251 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CDH23Q9H251 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH23Q9H251 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDH23Q9H251 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH23Q9H251 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH23Q9H251 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH23Q9H251 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH23Q9H251 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 AL023803.3-201ENST00000615559 522 ntBASIC21.15■□□□□ 0.98
CDH23Q9H251 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH23Q9H251 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH23Q9H251 AC009078.2-202ENST00000463353 338 ntBASIC21.14■□□□□ 0.98
CDH23Q9H251 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.14■□□□□ 0.98
CDH23Q9H251 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.14■□□□□ 0.98
CDH23Q9H251 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH23Q9H251 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.14■□□□□ 0.98
CDH23Q9H251 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH23Q9H251 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH23Q9H251 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.14■□□□□ 0.98
CDH23Q9H251 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDH23Q9H251 AC011506.1-201ENST00000474329 610 ntBASIC21.14■□□□□ 0.97
CDH23Q9H251 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH23Q9H251 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDH23Q9H251 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CDH23Q9H251 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH23Q9H251 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH23Q9H251 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH23Q9H251 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH23Q9H251 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 C1QL1P1-201ENST00000568105 661 ntBASIC21.13■□□□□ 0.97
CDH23Q9H251 HYMAI.1-201ENST00000620949 238 ntBASIC21.13■□□□□ 0.97
CDH23Q9H251 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH23Q9H251 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDH23Q9H251 SLC25A1P2-201ENST00000430693 912 ntBASIC21.13■□□□□ 0.97
CDH23Q9H251 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms