Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PCDH11YQ9BZA8 HLA-A-209ENST00000638375 975 ntBASIC25.81■■□□□ 1.72
PCDH11YQ9BZA8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH11YQ9BZA8 AC012676.1-201ENST00000574705 1949 ntBASIC25.81■■□□□ 1.72
PCDH11YQ9BZA8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH11YQ9BZA8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 AF106564.1-201ENST00000607058 2553 ntBASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 SLC25A1P4-201ENST00000567977 778 ntBASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 AC130371.2-201ENST00000619443 611 ntBASIC25.8■■□□□ 1.72
PCDH11YQ9BZA8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 AC022616.7-201ENST00000525383 220 ntBASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 AC011298.2-201ENST00000617989 482 ntBASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PCDH11YQ9BZA8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 AC096733.2-201ENST00000609937 1394 ntBASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH11YQ9BZA8 AC007225.1-201ENST00000566331 1836 ntBASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 HMGA1P5-201ENST00000412453 271 ntBASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 AK4P3-201ENST00000418260 669 ntBASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 BX664615.1-201ENST00000443558 458 ntBASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH11YQ9BZA8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 AC092720.2-201ENST00000602388 1665 ntBASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH11YQ9BZA8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC004951.3-201ENST00000418645 1148 ntBASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 MFAP1P1-201ENST00000442257 1255 ntBASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC008040.2-201ENST00000461049 708 ntBASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC063952.2-201ENST00000498792 1227 ntBASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDH11YQ9BZA8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms