Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 AC008550.1-201ENST00000511500 884 ntBASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 RNF165-205ENST00000588679 2904 ntBASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SSBP3Q9BWW4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 RPS2P4-201ENST00000476944 856 ntBASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSBP3Q9BWW4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
SSBP3Q9BWW4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.48■□□□□ 0.23
SSBP3Q9BWW4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms