Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 BX119927.1-201ENST00000636596 1552 ntBASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 AC026471.6-201ENST00000622954 1905 ntBASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 AC010542.4-201ENST00000563151 1910 ntBASIC19.9■□□□□ 0.78
LRFN3Q9BTN0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 AP002414.4-201ENST00000589764 1148 ntBASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRFN3Q9BTN0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 AC027796.2-201ENST00000575326 344 ntBASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 AL121912.1-201ENST00000603683 238 ntBASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.88■□□□□ 0.77
LRFN3Q9BTN0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 AP006587.1-201ENST00000534129 1502 ntBASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 SPDYE15P-201ENST00000424157 909 ntBASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 PMS2P2-201ENST00000425039 1128 ntBASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 KRT18P58-201ENST00000527480 1120 ntBASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 GCSHP2-201ENST00000560971 527 ntBASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRFN3Q9BTN0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 TSPY12P-201ENST00000421279 868 ntBASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 AC244107.1-201ENST00000442033 332 ntBASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 AC011498.5-201ENST00000592027 486 ntBASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRFN3Q9BTN0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms