Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.5■□□□□ 0.71
CCM2Q9BSQ5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 AC128676.1-201ENST00000454392 318 ntBASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 AL121906.2-201ENST00000621597 723 ntBASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCM2Q9BSQ5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AL121829.2-201ENST00000620908 328 ntBASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 TMEM191A-211ENST00000637163 1067 ntBASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AC073648.6-201ENST00000641589 218 ntBASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AC116351.2-201ENST00000606540 1585 ntBASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 AC018553.1-201ENST00000616682 1458 ntBASIC19.48■□□□□ 0.71
CCM2Q9BSQ5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 AP001271.2-201ENST00000624018 1556 ntBASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCM2Q9BSQ5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 AC069544.1-201ENST00000609399 999 ntBASIC19.46■□□□□ 0.71
CCM2Q9BSQ5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.45■□□□□ 0.7
CCM2Q9BSQ5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms