Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 NTF6G-201ENST00000591094 616 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 FP700111.2-201ENST00000619190 1892 ntBASIC16.62■□□□□ 0.25
CLCC1Q96S66 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCC1Q96S66 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCC1Q96S66 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 AC116562.4-201ENST00000641316 2276 ntBASIC16.61■□□□□ 0.25
CLCC1Q96S66 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 MIR6821-201ENST00000617625 74 ntBASIC16.61■□□□□ 0.25
CLCC1Q96S66 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCC1Q96S66 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 AC120498.9-201ENST00000339021 3867 ntBASIC16.61■□□□□ 0.25
CLCC1Q96S66 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCC1Q96S66 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 RARRES2P6-201ENST00000567333 442 ntBASIC16.6■□□□□ 0.25
CLCC1Q96S66 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCC1Q96S66 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCC1Q96S66 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 KRT19P1-201ENST00000405746 1186 ntBASIC16.59■□□□□ 0.25
CLCC1Q96S66 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCC1Q96S66 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCC1Q96S66 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms