Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 AP005242.2-201ENST00000580065 1175 ntBASIC21.21■□□□□ 0.99
CASD1Q96PB1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.21■□□□□ 0.99
CASD1Q96PB1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASD1Q96PB1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 DGCR10-201ENST00000609839 495 ntBASIC21.2■□□□□ 0.98
CASD1Q96PB1 AC131212.4-201ENST00000623606 975 ntBASIC21.2■□□□□ 0.98
CASD1Q96PB1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CASD1Q96PB1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASD1Q96PB1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 SMG8-203ENST00000578922 2178 ntBASIC21.19■□□□□ 0.98
CASD1Q96PB1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASD1Q96PB1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.19■□□□□ 0.98
CASD1Q96PB1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 AC097488.1-201ENST00000507834 756 ntBASIC21.18■□□□□ 0.98
CASD1Q96PB1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASD1Q96PB1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.18■□□□□ 0.98
CASD1Q96PB1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 TSPY14P-201ENST00000303979 915 ntBASIC21.17■□□□□ 0.98
CASD1Q96PB1 AC104076.2-201ENST00000448912 469 ntBASIC21.17■□□□□ 0.98
CASD1Q96PB1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 AC010203.1-204ENST00000548782 407 ntBASIC21.17■□□□□ 0.98
CASD1Q96PB1 C2orf69P3-201ENST00000565542 1120 ntBASIC21.17■□□□□ 0.98
CASD1Q96PB1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 AC130371.2-201ENST00000619443 611 ntBASIC21.17■□□□□ 0.98
CASD1Q96PB1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASD1Q96PB1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CASD1Q96PB1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASD1Q96PB1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
CASD1Q96PB1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.16■□□□□ 0.98
CASD1Q96PB1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASD1Q96PB1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASD1Q96PB1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms