Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 AC073508.3-201ENST00000619697 1419 ntBASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 AC007225.1-201ENST00000566331 1836 ntBASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC46A1Q96NT5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 AL390955.1-201ENST00000428694 934 ntBASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC46A1Q96NT5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 FP700111.2-201ENST00000619190 1892 ntBASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 NIFKP9-201ENST00000419265 221 ntBASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SLC46A1Q96NT5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 KRT16P1-201ENST00000399124 1418 ntBASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 HLA-G-202ENST00000376815 851 ntBASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 HLA-G-203ENST00000376818 1127 ntBASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC46A1Q96NT5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 SLC25A3P1-201ENST00000443844 931 ntBASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC46A1Q96NT5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms