Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF48Q96MX3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 KRT16P5-201ENST00000455284 522 ntBASIC16.12■□□□□ 0.17
ZNF48Q96MX3 KRT18P21-201ENST00000515767 1272 ntBASIC16.12■□□□□ 0.17
ZNF48Q96MX3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 AF186192.3-201ENST00000583427 947 ntBASIC16.12■□□□□ 0.17
ZNF48Q96MX3 AC026471.5-201ENST00000615068 467 ntBASIC16.12■□□□□ 0.17
ZNF48Q96MX3 AP005212.1-201ENST00000581547 1997 ntBASIC16.12■□□□□ 0.17
ZNF48Q96MX3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF48Q96MX3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 MIR1224-201ENST00000408193 85 ntBASIC16.11■□□□□ 0.17
ZNF48Q96MX3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 AL121906.2-201ENST00000621597 723 ntBASIC16.11■□□□□ 0.17
ZNF48Q96MX3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 PTBP1P-201ENST00000554374 1601 ntBASIC16.11■□□□□ 0.17
ZNF48Q96MX3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF48Q96MX3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AC007225.1-201ENST00000566331 1836 ntBASIC16.1■□□□□ 0.17
ZNF48Q96MX3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AP003071.4-201ENST00000562276 1284 ntBASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ZNF48Q96MX3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 FAM197Y1-201ENST00000421178 764 ntBASIC16.09■□□□□ 0.17
ZNF48Q96MX3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 CD177P1-201ENST00000606252 935 ntBASIC16.09■□□□□ 0.17
ZNF48Q96MX3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF48Q96MX3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms