Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 TMEM191A-211ENST00000637163 1067 ntBASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 AC018553.1-201ENST00000616682 1458 ntBASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.87■□□□□ 0.93
VCPIP1Q96JH7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 AC097658.1-201ENST00000475555 843 ntBASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCPIP1Q96JH7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 HLA-B-256ENST00000639848 1089 ntBASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.85■□□□□ 0.93
VCPIP1Q96JH7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VCPIP1Q96JH7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
VCPIP1Q96JH7 TFP1-202ENST00000475455 1573 ntBASIC20.83■□□□□ 0.92
VCPIP1Q96JH7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.83■□□□□ 0.92
VCPIP1Q96JH7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VCPIP1Q96JH7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VCPIP1Q96JH7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VCPIP1Q96JH7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms