Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 AC079140.4-201ENST00000507448 529 ntBASIC19.45■□□□□ 0.7
SPDL1Q96EA4 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
SPDL1Q96EA4 AC131212.1-201ENST00000613771 668 ntBASIC19.45■□□□□ 0.7
SPDL1Q96EA4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AC116050.2-201ENST00000612102 1779 ntBASIC19.44■□□□□ 0.7
SPDL1Q96EA4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AC018470.1-201ENST00000624790 3129 ntBASIC19.44■□□□□ 0.7
SPDL1Q96EA4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPDL1Q96EA4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 AC125437.2-201ENST00000625180 2167 ntBASIC19.43■□□□□ 0.7
SPDL1Q96EA4 AC008406.3-201ENST00000620001 1374 ntBASIC19.43■□□□□ 0.7
SPDL1Q96EA4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPDL1Q96EA4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 AC120498.10-201ENST00000621827 505 ntBASIC19.42■□□□□ 0.7
SPDL1Q96EA4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPDL1Q96EA4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms