Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USP9XQ93008 MFAP1P1-201ENST00000442257 1255 ntBASIC17.36■□□□□ 0.37
USP9XQ93008 YBX1P10-201ENST00000444752 975 ntBASIC17.36■□□□□ 0.37
USP9XQ93008 FAAHP1-202ENST00000446499 1238 ntBASIC17.36■□□□□ 0.37
USP9XQ93008 PRSS44-201ENST00000515154 1146 ntBASIC17.36■□□□□ 0.37
USP9XQ93008 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.36■□□□□ 0.37
USP9XQ93008 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.36■□□□□ 0.37
USP9XQ93008 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.36■□□□□ 0.37
USP9XQ93008 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP9XQ93008 AL355385.1-201ENST00000606123 409 ntBASIC17.36■□□□□ 0.37
USP9XQ93008 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.36■□□□□ 0.37
USP9XQ93008 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP9XQ93008 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 AL022342.1-201ENST00000400363 863 ntBASIC17.35■□□□□ 0.37
USP9XQ93008 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.35■□□□□ 0.37
USP9XQ93008 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
USP9XQ93008 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.35■□□□□ 0.37
USP9XQ93008 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.35■□□□□ 0.37
USP9XQ93008 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP9XQ93008 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.35■□□□□ 0.37
USP9XQ93008 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 ATP5G2P1-201ENST00000433580 426 ntBASIC17.35■□□□□ 0.37
USP9XQ93008 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.35■□□□□ 0.37
USP9XQ93008 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.35■□□□□ 0.37
USP9XQ93008 AL031432.5-201ENST00000641059 760 ntBASIC17.35■□□□□ 0.37
USP9XQ93008 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.35■□□□□ 0.37
USP9XQ93008 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.35■□□□□ 0.37
USP9XQ93008 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.35■□□□□ 0.37
USP9XQ93008 AC004951.3-201ENST00000418645 1148 ntBASIC17.35■□□□□ 0.37
USP9XQ93008 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP9XQ93008 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.34■□□□□ 0.37
USP9XQ93008 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
USP9XQ93008 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.34■□□□□ 0.37
USP9XQ93008 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.34■□□□□ 0.37
USP9XQ93008 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.34■□□□□ 0.37
USP9XQ93008 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
USP9XQ93008 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9XQ93008 KRT18P38-201ENST00000449496 1282 ntBASIC17.34■□□□□ 0.37
USP9XQ93008 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.34■□□□□ 0.37
USP9XQ93008 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.34■□□□□ 0.37
USP9XQ93008 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP9XQ93008 AP006587.1-201ENST00000534129 1502 ntBASIC17.33■□□□□ 0.37
USP9XQ93008 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.33■□□□□ 0.37
USP9XQ93008 TSPY17P-201ENST00000450329 467 ntBASIC17.33■□□□□ 0.36
USP9XQ93008 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9XQ93008 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.33■□□□□ 0.36
USP9XQ93008 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9XQ93008 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.33■□□□□ 0.36
USP9XQ93008 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9XQ93008 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.33■□□□□ 0.36
USP9XQ93008 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9XQ93008 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
USP9XQ93008 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9XQ93008 AC004980.1-204ENST00000429707 299 ntBASIC17.33■□□□□ 0.36
USP9XQ93008 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.33■□□□□ 0.36
USP9XQ93008 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9XQ93008 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP9XQ93008 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9XQ93008 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.32■□□□□ 0.36
USP9XQ93008 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9XQ93008 Z85996.1-201ENST00000494644 937 ntBASIC17.32■□□□□ 0.36
USP9XQ93008 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP9XQ93008 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP9XQ93008 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USP9XQ93008 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9XQ93008 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USP9XQ93008 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
USP9XQ93008 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9XQ93008 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9XQ93008 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms