Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3S1Q92572 DUX4L19-201ENST00000557448 1267 ntBASIC17.45■□□□□ 0.38
AP3S1Q92572 AC011298.3-201ENST00000615796 283 ntBASIC17.45■□□□□ 0.38
AP3S1Q92572 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
AP3S1Q92572 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3S1Q92572 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
AP3S1Q92572 KRT8P36-201ENST00000489121 1440 ntBASIC17.45■□□□□ 0.38
AP3S1Q92572 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.45■□□□□ 0.38
AP3S1Q92572 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
AP3S1Q92572 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3S1Q92572 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP3S1Q92572 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
AP3S1Q92572 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 AL390961.4-201ENST00000623958 2535 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 SERBP1P1-201ENST00000396021 1160 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 POU5F1P4-201ENST00000413175 1085 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.44■□□□□ 0.38
AP3S1Q92572 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 AC008175.2-201ENST00000612840 297 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 CROCCP3-202ENST00000420820 1947 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3S1Q92572 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
AP3S1Q92572 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3S1Q92572 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
AP3S1Q92572 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3S1Q92572 HTR7P1-202ENST00000624664 4411 ntBASIC17.44■□□□□ 0.38
AP3S1Q92572 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3S1Q92572 AC005332.8-201ENST00000622750 2735 ntBASIC17.43■□□□□ 0.38
AP3S1Q92572 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3S1Q92572 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3S1Q92572 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3S1Q92572 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3S1Q92572 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3S1Q92572 AC020916.1-201ENST00000587762 1774 ntBASIC17.43■□□□□ 0.38
AP3S1Q92572 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S1Q92572 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AP3S1Q92572 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3S1Q92572 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 RARRES2P11-201ENST00000635158 484 ntBASIC17.42■□□□□ 0.38
AP3S1Q92572 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP3S1Q92572 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3S1Q92572 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S1Q92572 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP3S1Q92572 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP3S1Q92572 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.41■□□□□ 0.38
AP3S1Q92572 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
AP3S1Q92572 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S1Q92572 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
AP3S1Q92572 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms