Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 AC110285.5-201ENST00000611501 352 ntBASIC18.68■□□□□ 0.58
TM9SF4Q92544 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 AL023875.1-201ENST00000640777 796 ntBASIC18.68■□□□□ 0.58
TM9SF4Q92544 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.68■□□□□ 0.58
TM9SF4Q92544 AC027702.1-201ENST00000563810 1770 ntBASIC18.68■□□□□ 0.58
TM9SF4Q92544 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM9SF4Q92544 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF4Q92544 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF4Q92544 RPS2P55-201ENST00000397318 883 ntBASIC18.67■□□□□ 0.58
TM9SF4Q92544 AC107956.1-201ENST00000494359 873 ntBASIC18.67■□□□□ 0.58
TM9SF4Q92544 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 AC124016.1-201ENST00000609552 612 ntBASIC18.67■□□□□ 0.58
TM9SF4Q92544 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.67■□□□□ 0.58
TM9SF4Q92544 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF4Q92544 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM9SF4Q92544 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.66■□□□□ 0.58
TM9SF4Q92544 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM9SF4Q92544 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 MIR4785-201ENST00000585005 73 ntBASIC18.65■□□□□ 0.58
TM9SF4Q92544 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 REXO1L12P-201ENST00000622156 912 ntBASIC18.65■□□□□ 0.58
TM9SF4Q92544 AC006557.6-201ENST00000623071 864 ntBASIC18.65■□□□□ 0.58
TM9SF4Q92544 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM9SF4Q92544 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.65■□□□□ 0.58
TM9SF4Q92544 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TM9SF4Q92544 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
TM9SF4Q92544 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.64■□□□□ 0.58
TM9SF4Q92544 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TM9SF4Q92544 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.64■□□□□ 0.57
TM9SF4Q92544 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TM9SF4Q92544 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms