Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF139Q8WU17 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF139Q8WU17 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 PRKY-204ENST00000533551 1019 ntBASIC20.79■□□□□ 0.92
RNF139Q8WU17 AC142381.4-202ENST00000563973 229 ntBASIC20.79■□□□□ 0.92
RNF139Q8WU17 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 RN7SL471P-201ENST00000580476 299 ntBASIC20.79■□□□□ 0.92
RNF139Q8WU17 AL121906.2-201ENST00000621597 723 ntBASIC20.79■□□□□ 0.92
RNF139Q8WU17 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF139Q8WU17 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF139Q8WU17 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AC112907.3-201ENST00000577781 2400 ntBASIC20.78■□□□□ 0.92
RNF139Q8WU17 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 C1QBPP2-201ENST00000528754 825 ntBASIC20.78■□□□□ 0.92
RNF139Q8WU17 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF139Q8WU17 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF139Q8WU17 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF139Q8WU17 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RNF139Q8WU17 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 AL158047.1-201ENST00000445918 881 ntBASIC20.77■□□□□ 0.92
RNF139Q8WU17 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 MTDHP1-201ENST00000605323 784 ntBASIC20.77■□□□□ 0.92
RNF139Q8WU17 AL121829.2-201ENST00000620908 328 ntBASIC20.77■□□□□ 0.92
RNF139Q8WU17 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF139Q8WU17 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF139Q8WU17 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF139Q8WU17 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF139Q8WU17 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
RNF139Q8WU17 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF139Q8WU17 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF139Q8WU17 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF139Q8WU17 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 AC098590.1-201ENST00000468126 897 ntBASIC20.76■□□□□ 0.91
RNF139Q8WU17 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF139Q8WU17 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 BX119927.1-201ENST00000636596 1552 ntBASIC20.76■□□□□ 0.91
RNF139Q8WU17 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF139Q8WU17 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF139Q8WU17 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms