Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC63Q8NA47 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 SLC7A5P2-201ENST00000553010 536 ntBASIC20.04■□□□□ 0.8
CCDC63Q8NA47 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 AL031432.3-201ENST00000607698 485 ntBASIC20.04■□□□□ 0.8
CCDC63Q8NA47 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC63Q8NA47 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L2-201ENST00000561772 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L6-201ENST00000626483 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L1-201ENST00000627662 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L8-201ENST00000629013 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L3-201ENST00000630187 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L7-201ENST00000630678 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 DUX4L5-201ENST00000630834 1275 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC63Q8NA47 AC005332.8-201ENST00000622750 2735 ntBASIC20.03■□□□□ 0.8
CCDC63Q8NA47 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC63Q8NA47 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC63Q8NA47 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC63Q8NA47 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC63Q8NA47 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC63Q8NA47 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC63Q8NA47 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 AC104187.1-201ENST00000607510 612 ntBASIC20.01■□□□□ 0.79
CCDC63Q8NA47 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 AL691432.2-201ENST00000607222 2038 ntBASIC20.01■□□□□ 0.79
CCDC63Q8NA47 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC63Q8NA47 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms